Fungal Genomics

Introduction to the Book: Overview of Fungal Genomics.- Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing.- Purification of Fungal High Molecular Weight Genomic DNA from Environmental Samples.- Genome Sequencing.- Methods for Genomic Characterization and Maintenance of Anaerobic Fungi.- Efficient Extraction Method for High Quality Fungal RNA from Complex Lignocellulosic Substrates.- Isolation of high quality RNA for Metatranscriptome Analysis of Lignocellulose Digestion in the Rumen.- Fungal Transcriptomics.- Mass Spectrometrybased Proteomics.- Mass Spectrometry Based Metabolomics.- Genome Editing - CRISPR/cas9.- Evolutionary Adaptation to Generate Mutants.- Genome Assembly.- Fungal Epigenomics: Detection and Analysis.- Fungal Genome Annotation.- Manual Gene Curation and Functional Annotation.- Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes.- Genomic Sequence Variation Analysis by Resequencing.- ChIP-seqAnalysis in Neurospora crass.- Fungal Phylogenomics.- Phylogenetic Analysis of Protein Family.- Parasexual Crossings for Bulk Segregant Analysis in Aspergillus Niger To Facilitate Mutant Identification Via Whole Genome Sequencing.